福井 学の低温研便り

北海道大学 低温科学研究所 微生物生態学分野
大学院:環境科学院 生物圏科学専攻 分子生物学コース

ハイパーアメーバと変形菌

2010-02-06 22:50:30 | 研究室紹介
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加茂野晃子さんを中心にして、オックスフォード大学動物学教室のCAVALIER-SMITHさんとFIORE-DONNOさんとともに行った共同研究の成果の一部がオンラインで公開されました英国王立協会2国間国際共同研究事業)。<o:p></o:p>

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ANNA MARIA FIORE-DONNO, AKIKO KAMONO, EMA E. CHAO, MANABU FUKUI and THOMAS CAVALIER-SMITH.<o:p></o:p> Invalidation of Hyperamoeba by Transferring its Species to Other Genera of Myxogastria.<o:p></o:p> Journal of Eukaryotic Microbiology<o:p></o:p>

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ABSTRACT. The genus Hyperamoeba Alexeieff, 1923 was established to accommodate an aerobic amoeba exhibiting three life stages?amoeba, flagellate, and cyst. As more species/strains were isolated, it became increasingly evident from small subunit (SSU) gene phylogenies and ultrastructure that Hyperamoeba is polyphyletic and its species occupy different positions within the class Myxogastria. To pinpoint Hyperamoeba strains within other myxogastrid genera we aligned numerous myxogastrid sequences: whole small subunit ribosomal (SSU or 18S rRNA) gene for 50 dark-spored (i.e. Stemonitida and Physarida) Myxogastria (including a new "Hyperamoeba"/Didymium sequence) and a ?400-bp SSU fragment for 147 isolates assigned to 10 genera of the order Physarida. Phylogenetic analyses show unambiguously that the type species Hyperamoeba flagellata is a Physarum (Physarum flagellatum comb. nov.) as it nests among other Physarum species as robust sister to Physarum didermoides. Our trees also allow the following allocations: five Hyperamoeba strains to the genus Stemonitis; Hyperamoeba dachnaya, Pseudodidymium cryptomastigophorum, and three other Hyperamoeba strains to the genus Didymium; and two further Hyperamoeba strains to the family Physaridae. We therefore abandon the polyphyletic and redundant genus Hyperamoeba. We discuss the implications for the ecology and evolution of Myxogastria, whose amoeboflagellates are more widespread than previous inventories supposed, being now found in freshwater and even marine environments.

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